PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0095s0774.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WRKY
Protein Properties Length: 550aa    MW: 59401.3 Da    PI: 7.1861
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0095s0774.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.81.5e-30231290159
                          ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                          ++Dg++WrKYGqK  kg+++pr+YYrCt a  Cpv+k+v+r+a+d ++++itYeg+Hnh+
  Kaladp0095s0774.1.p 231 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAaACPVRKQVQRCADDMSILIITYEGTHNHP 290
                          58***************************99****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.6E-31217292IPR003657WRKY domain
SuperFamilySSF1182901.96E-27224292IPR003657WRKY domain
PROSITE profilePS5081128.369226292IPR003657WRKY domain
SMARTSM007743.1E-36231291IPR003657WRKY domain
PfamPF031066.1E-27232290IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006952Biological Processdefense response
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 550 aa     Download sequence    Send to blast
MEGYNASLER ASGGGRAMED SVELSSTDSD GDRACNLQSV TSKDAQLQSA KIEMGEVRKE  60
NERLRLHLDK MIKDYQALQK QVQDIENAEL PSTSPDFNQA TAASDSRQEF EEENELVSLS  120
LGRTASIDLK RSKVIQGNES DSLALGLEDF KVFEEPKSDA PVENLAVQGH EIIRSSSEET  180
TREELAAASS WPPQKVSKRS SEDNNEPSSY PRSSGKRARV CLRIRCETPT MNDGCQWRKY  240
GQKIAKGNPC PRAYYRCTVA AACPVRKQVQ RCADDMSILI ITYEGTHNHP LPISATGLAS  300
TTSAAASMLL SGSSSTVANP TTSRPSHSFS AIPNKHIFQQ QYQLPTSGSS FNPNSHHQTI  360
TLDLTSSNNA ATSSQHSPHF NLFSRSSSMS YPTHQYSSRP RPTSLSFSSS SPANPPSWAN  420
NNKMLYSSST SMSQFSTSTL DYSHFYQSTK QRNSNNPASN SNSTSPPVTE SAITAALTSD  480
PSFQSALAAA LTTIIGGRVV PNFGSSSTNA QRAGSSSLML GQAHLPIQPD ALAKSTSTSP  540
KDNVKEHSS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-18218292174WRKY transcription factor 1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.16e-58WRKY DNA-binding protein 72